Index

A

abbr (clinicore.Medication attribute) add_source() (clinicore.Medication class method) add_synonym() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) adelete() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) administered_datetime (clinicore.Treatment attribute) age (clinicore.Patient attribute)

arefresh_from_db() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) artifacts (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute) asave() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

B

batch (clinicore.Biosample attribute)

Biosample (class in clinicore) birth_date (clinicore.Patient attribute)

C

cell_types (clinicore.Biosample attribute) chembl_id (clinicore.Medication attribute) clean() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) clean_fields() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) clinical_trial (clinicore.Biosample attribute)

ClinicalTrial (class in clinicore) clinicore module collections (clinicore.ClinicalTrial attribute) created_at (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute) created_by (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute)

D

date_error_message() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) deceased (clinicore.Patient attribute) deceased_date (clinicore.Patient attribute) delete() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

description (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) df() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) diseases (clinicore.Biosample attribute) dosage (clinicore.Treatment attribute) dosage_unit (clinicore.Treatment attribute) duration (clinicore.Treatment attribute)

E

ethnicity (clinicore.Patient attribute)

F

filter() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) from_public() (clinicore.Medication class method)

from_source() (clinicore.Medication class method) from_values() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method)

G

gender (clinicore.Patient attribute) GENDER_CHOICES (clinicore.Patient attribute) get() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) get_constraints() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

get_deferred_fields() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) get_gender_display() (clinicore.Patient method) get_status_display() (clinicore.Treatment method)

I

import_from_source() (clinicore.Medication class method) inspect() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method)

L

list_source() (clinicore.Medication class method) lookup() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method)

M

Medication (class in clinicore) medication (clinicore.Treatment attribute)

medications (clinicore.Biosample attribute) module clinicore

N

name (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute)

O

objective (clinicore.ClinicalTrial attribute)

ontology_id (clinicore.Medication attribute)

P

parents (clinicore.Medication attribute) Patient (class in clinicore) patient (clinicore.Biosample attribute) prepare_database_save() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

public() (clinicore.Medication class method)

R

refresh_from_db() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) remove_synonym() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

route (clinicore.Treatment attribute) run (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute)

S

save() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) save_base() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) search() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) serializable_value() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

set_abbr() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) site (clinicore.Treatment attribute) source (clinicore.Medication attribute) standardize() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) status (clinicore.Treatment attribute) STATUS_CHOICES (clinicore.Treatment attribute) synonyms (clinicore.Medication attribute)

T

tissues (clinicore.Biosample attribute)

title (clinicore.ClinicalTrial attribute) Treatment (class in clinicore)

U

uid (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute) unique_error_message() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

updated_at (clinicore.Biosample attribute) (clinicore.ClinicalTrial attribute) (clinicore.Medication attribute) (clinicore.Patient attribute) (clinicore.Treatment attribute) using() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method)

V

validate() (clinicore.Biosample class method) (clinicore.ClinicalTrial class method) (clinicore.Medication class method) (clinicore.Patient class method) (clinicore.Treatment class method) validate_constraints() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method)

validate_unique() (clinicore.Biosample method) (clinicore.ClinicalTrial method) (clinicore.Medication method) (clinicore.Patient method) (clinicore.Treatment method) view_parents() (clinicore.Medication method)